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InTeOp – 2012, 335 pagesISBN: 9535108788, 9789535108788
The book introduces the basic concepts and then explains its application to problems of great relevance, so both novice and expert readers can benefit from the information and research works presented here.This book is divided into different research areas relevant in Bioinformatics such as biological networks, next generation sequencing, high performance computing, molecular modeling, structural bioinformatics, molecular modeling and intelligent data analysis.Contents:PrefaceSection 1 Analysis of Biological NetworksHierarchical Biological Pathway Data Integration and MiningInvestigation on Nuclear Transport of Trypanosoma brucei: An in silico ApproachSystemic Approach to the Genome Integration Process of Human LentivirusSection 2 Sequence AnalysisSeqAnt 2012: Recent Developments in Next-Generation Sequencing AnnotationSection 3 High-Performance ComputingTowards a Hybrid Federated Cloud Platform to Efficiently Execute BioinformaticsWorkflowsHardware Accelerated Molecular Docking: A SurveySection 4 Molecular ModelingIncorporating Molecular Dynamics Simulations into Rational Drug Design: A Case Study on Influenza a NeuraminidasesUsing Molecular Modelling to Study Interactions Between Molecules with Biological ActivitySection 5 Structural BioinformaticsOn the Assessment of Structural Protein Models with ROSETTA-Design and HMMer: Value, Potential and LimitationsSection 6 Intelligent Data AnalysisBacterial Promoter Features Description and Their Application on E. coli in silico Prediction and Recognition ApproachesComputational Approaches for Designing Efficient and Specific siRNAsNovel microRNA Cloning Using BioinformaticsEnsemble Clustering for Biological DatasetsResearch on Pattern Matching with Wildcards and Length Constraints: Methods and Completeness
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Edited by Horacio Pérez-Sánchez BIOINFORMATICS Edited by Horacio Pérez-Sánchez Bioinformatics http://dx.doi.org/10.5772/3089 Edited by Horacio Pérez-Sánchez Contributors Shubhalaxmi Kher, Jianling Peng, Eve Syrkin Wurtele, Julie Dickerson, Mohd Fakharul Zaman Raja Yahya, Umi Marshida Abdul Hamid, Farida Zuraina Mohd Yusof, Felipe García-Vallejo, Martha Cecilia Domínguez, Matthew Ezewudo, Promita Bose, Kajari Mondal, Viren Patel, Dhanya Ramachandran, Michael E. Zwick, Hugo Saldanha, Edward Ribeiro, Carlos Borges, Aletéia Araújo, Ricardo Gallon, Maristela Holanda, Maria Emília Walter, Roberto Togawa, João Carlos Setubal, Imre Pechan, Béla Fehér, Ly Le, María J. R. Yunta, León P. Martínez-Castilla, Rogelio Rodríguez-Sotres, Scheila de Avila e Silva, Sergio Echeverrigaray, Suman Ghosal, Shaoli Das, Jayprokas Chakrabarti, Yoshiaki Mizuguchi, Takuya Mishima, Eiji Uchida, Toshihiro Takizawa, Harun Pirim, Şadi Evren Şeker, Haiping Wang, Taining Xiang, Xuegang Hu Published by InTech Janeza Trdine 9, 51000 Rijeka, Croatia Copyright © 2012 InTech All chapters are Open Access distributed under the Creative Commons Attribution 3.0 license, which allows users to download, copy and build upon published articles even for commercial purposes, as long as the author and publisher are properly credited, which ensures maximum dissemination and a wider impact of our publications. After this work has been published by InTech, authors have the right to republish it, in whole or part, in any publication of which they are the author, and to make other personal use of the work. Any republication, referencing or personal use of the work must explicitly identify the original source. Notice Statements and opinions expressed in the chapters are these of the individual contributors and not necessarily those of the editors or publisher. No responsibility is